Other Resources
| Tool | Description | PubMed |
|---|---|---|
| bioDBnet | biological DataBase network is an application integrating a vast number of biological databases including Gene, UniProt, Ensembl, GO, Affy, RefSeq etc | Pubmed |
| Tool | Description | PubMed |
|---|---|---|
| Quadfinder | Server for identification and analysis of cruciform DNA motifs in nucleotide sequences, Institute of Genomics and Integrative Biology, Delhi, India. |
| Tool | Description | PubMed |
|---|---|---|
| Greglist | A database listing potential G-quadruplex regulated genes, The Tianjin University BioInformatics Centre, China | Pubmed |
| GRSDB | G-Rich Sequences DataBase, Ramapo College of NJ, USA | Pubmed |
| QGRS Mapper | A software program that generates information on composition and distribution of putative Quadruplex forming G-Rich Sequences, Ramapo College of NJ, USA | Pubmed |
| QuadBase | A database of quadruplex motifs. It is composed of two parts (EuQuad and ProQuad). EuQuad gives information on quadruplex motifs present in human, chimpanzee, rat and mouse genes. ProQuad contains quadruplex information of 146 prokaryotes, Institute of Genomics and Integrative Biology, India | Pubmed |
| QuadFinder | Server for identification and analysis of quadruplex-forming motifs in nucleotide sequences, Institute of Genomics and Integrative Biology, Delhi, India. | Pubmed |
| Tool | Description | PubMed |
|---|---|---|
| Inverted Repeats Finder (IRF) | Command line version of the IRF algorithm used to investigate inverted repeat structure, Boston University, USA | Pubmed |
| Tool | Description | PubMed |
|---|---|---|
| lobSTR | A tool for profiling Short Tandem Repeats (STRs) from high throughput sequencing data, Harvard-MIT Division of Health Sciences and Technology, Massachusetts Institute of Technology, USA | Pubmed |
| Tool | Description | PubMed |
|---|---|---|
| TTS Mapping | Integrative web tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome, Bioinformatics Institute, Singapore | Pubmed |
| TRACTS | A web program designed to detect and analyze binary tracts in a DNA sequence, The Weizmann Institute of Science, Rehovot, Israel | Pubmed |
| TFO | A search engine for triplex-forming oligonucleotide target sequences, MD Anderson Cancer Center, The University of Texas | Pubmed |
| Tool | Description | PubMed |
|---|---|---|
| Z-Hunt-II | Z-DNA Search Tool, Center for Gene Research and Biotechnology, Oregon State University | Pubmed |